BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027F01SP1|AL428751
(813 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig733 1574 0.0
>3x_Contig733
Length = 3667
Score = 1574 bits (789), Expect = 0.0
Identities = 803/813 (98%)
Strand = Plus / Minus
Query: 1 gttctggtctaggtacgaatgaaggaacatgaaaaacgactagtctcgtagtgaatcacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1399 gttctggtctaggtacgaatgaaggaacatgaaaaacgactagtctcgtagtgaatcacg 1340
Query: 61 atgttcagaaaatcacataacggaatgatggtataaaatcgaagaacccgttagtacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1339 atgttcagaaaatcacataacggaatgatggtataaaatcgaagaacccgttagtacact 1280
Query: 121 catggtggggaaaaccattaaacgaatagatcagcacggtaaatcctcgcattctttatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1279 catggtggggaaaaccattaaacgaatagatcagcacggtaaatcctcgcattctttatc 1220
Query: 181 tgatattaaatgtcttctactggtatgagcgtatgtcatgataagaatcttaaacggaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1219 tgatattaaatgtcttctactggtatgagcgtatgtcatgataagaatcttaaacggaaa 1160
Query: 241 acacccacataaacgaacagtgggattggaatcattgtcgcaataagaaatcaacatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1159 acacccacataaacgaacagtgggattggaatcattgtcgcaataagaaatcaacatgaa 1100
Query: 301 acgcatccatcgcctaaaatagatagcatataatattcaagactaacagaaatagtatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1099 acgcatccatcgcctaaaatagatagcatataatattcaagactaacagaaatagtatac 1040
Query: 361 gagttgcagacctacattccgaagatgaaaattttctagttgcggcttaaacggctatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 gagttgcagacctacattccgaagatgaaaattttctagttgcggcttaaacggctatat 980
Query: 421 cctttttttttttttttttttttkgggcgcctcycgaatcctttagtctttcggagcaac 480
||||||||||||||||||||||| | |||| || ||||||||||||||||||||||||||
Sbjct: 979 ccttttttttttttttttttttttgtgcgcttctcgaatcctttagtctttcggagcaac 920
Query: 481 gatgattacacagcaggaagtaaaaaaagaaagagcctagaaatatgttgaatgtcatga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 gatgattacacagcaggaagtaaaaaaagaaagagcctagaaatatgttgaatgtcatga 860
Query: 541 caaattacagacattactacggcactgcgcattgatgtgtccgagccattgtcattccaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 caaattacagacattactacggcactgcgcattgatgtgtccgagccattgtcattccaa 800
Query: 601 atggacaaaaaaaaaaagactattgtctaatttttttttatgcgagattgtccatcttaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 atggacaaaaaaaaaaagactattgtctaatttttttttatgcgagattgtccatcttaa 740
Query: 661 aagtttaaaaagaaaatcaacccaggtctcgagagcgaaacccaaacaccgrgaattggr 720
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 739 aagtttaaaaagaaaatcaacccaggtctcgagagcgaaacccaaacaccgagaattgga 680
Query: 721 atgcmccaagaaawaamaaacaaaaatgcacatatactgcccgatgtcaatttacttttt 780
|||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 atgcaccaagaaataacaaacaaaaatgcacatatactgcccgatgtcaatttacttttt 620
Query: 781 tctctcactctttataacgaawacacatcatca 813
||||||||||||||||||||| |||||||||||
Sbjct: 619 tctctcactctttataacgaatacacatcatca 587
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 27,183
Number of Sequences: 1807
Number of extensions: 27183
Number of successful extensions: 4318
Number of sequences better than 1.0e-20: 1
length of query: 813
length of database: 10,358,551
effective HSP length: 16
effective length of query: 797
effective length of database: 10,329,639
effective search space: 8232722283
effective search space used: 8232722283
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)